BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012E03SP1|AL426373
(653 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1493 1262 0.0
>3x_Contig1493
Length = 12243
Score = 1262 bits (629), Expect = 0.0
Identities = 641/653 (98%)
Strand = Plus / Plus
Query: 1 tttttttgcttacgtctcatctcacgcttctgcaaaagggactgtvtcatcttttgtatt 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 3904 tttttttgcttacgtctcatctcacgcttctgcaaaagggactgtctcatcttttgtatt 3963
Query: 61 tmcagcgcggctgattctgatctcttaagagcmccgtmattgttcagttgtttactggtt 120
| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 3964 tccagcgcggctgattctgatctcttaagagccccgtcattgttcagttgtttactggtt 4023
Query: 121 ccatgatgagtggtgtcgctagtattattgccattgatattattttccggtcyttcgtaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 4024 ccatgatgagtggtgtcgctagtattattgccattgatattattttccggtccttcgtaa 4083
Query: 181 tgttgtaagtmtaatgaagcgagggagcgtgtmagcgccttattgggtaaatvaggattg 240
|||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 4084 tgttgtaagtctaatgaagcgagggagcgtgtcagcgccttattgggtaaatcaggattg 4143
Query: 241 aatctagcactgcttctagaatgtgaatgcaaatmtgttgacgatcttgccatgcgttga 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 4144 aatctagcactgcttctagaatgtgaatgcaaatctgttgacgatcttgccatgcgttga 4203
Query: 301 ttggctgctttcgagctggtagtgatattatgagtgctgttgggtacagatcgttgagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4204 ttggctgctttcgagctggtagtgatattatgagtgctgttgggtacagatcgttgagaa 4263
Query: 361 gatgtggattgtgtacggcggtgttccagtgaacgcaaggaagamgaagatgaacttgct 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4264 gatgtggattgtgtacggcggtgttccagtgaacgcaaggaagacgaagatgaacttgct 4323
Query: 421 gacgaagaattagaatccattggtataawtcttgcatgttttccaggatgataggggccc 480
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4324 gacgaagaattagaatccattggtataattcttgcatgttttccaggatgataggggccc 4383
Query: 481 tgtcgtatactgtbtctcgtagatcttctcctttgcatcggtaacgatttcgaggacatt 540
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4384 tgtcgtatactgtctctcgtagatcttctcctttgcatcggtaacgatttcgaggacatt 4443
Query: 541 cggtgtctactatgcaacagaacattgctatccgatttcgtgcctccgttagtgtccagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4444 cggtgtctactatgcaacagaacattgctatccgatttcgtgcctccgttagtgtccagt 4503
Query: 601 gttgtcggtactgctgtcgtgtggtttgcaactgcggaatctgttctctttat 653
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4504 gttgtcggtactgctgtcgtgtggtttgcaactgcggaatctgttctctttat 4556
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3003
Number of Sequences: 1807
Number of extensions: 3003
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 653
length of database: 10,358,551
effective HSP length: 16
effective length of query: 637
effective length of database: 10,329,639
effective search space: 6579980043
effective search space used: 6579980043
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.8 bits)